miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|112353032|gb|AM389459.1|AM389459 TTCTAAAAAAANNNGATTAATCTATACTCTTCAACAATGTCATCATCATCATCATCTTACTTGAGAGATGAAGATCTGAC
ACAAGAAACAAGAGATCTGATCTCTTCTCTTCCAAGCGAGAAAGGTTGGTTGGTGAGCCAAATGTATCAGTTTCAAGGAC
GTTGGCACACACAAGCCCTCTTACAAGGACTCTTGCAATACCAAAAACACTTTGAGGCCAAAGATTCCGACATTATCCTC
GTCACCAATCCTAAATCAGGTACCACTTGGTTAAAAGCTCTTGTCTTTTCTCTCATTAACCGACACAAGTTTCCAGTTTC
TTCTGGTGATCATCCTCTTCTTGTTACCAATCCGCACCTTCTCATACCCTTCTTGGAAGGAGTTTACTACGAGTCTCCAA
ATTTCGATTTCACTGAGTTGCCTTCTCCAAGACTCATGAACACACACATATCGCTTCTTTCCCTGCCCGAGTCCGTTAAG
AGCTCCTCTTGTAAGATTGTGTATTGTTGTAGGAACCCTAAGGACATGTTTGTGTCCTTATGGCATTTTGGAAAGAAACT
TGCTTCTCAAGAAACTGCTGATTATCCTATTGAAAAAGCGGTTGAAGCGTTTTGTCAAGGGAAGTTTATAGGTGGACCCT
TTTGGGATCATGTGCTGGAGTACTGGTATGCCAGCCTTGNNNATCCGAACAAGGTCTTATTTGTTACATACGAGGAGCTG
AAGANGCNGACTGGAGATACGATTANG




Most similar to sp|P52839|FSTL_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P52839|FSTL_ARATH Flavonol sulfotransferase-like OS=Arabidopsis
           thaliana GN=At2g03760 PE=1 SV=2
          Length = 326

 Score =  412 bits (1059), Expect = e-114
 Identities = 196/226 (86%), Positives = 210/226 (92%), Gaps = 1/226 (0%)
 Frame = +1

Query: 58  YLRDEDLTQETRDLISSLPSEKGWLVSQMYQFQGRWHTQALLQGLLQYQKHFEAKDSDII 237
           YL DEDLTQETR LISSLP EKGWLVS++Y+FQG WHTQA+LQG+L  QK FEAKDSDII
Sbjct: 10  YLGDEDLTQETRALISSLPKEKGWLVSEIYEFQGLWHTQAILQGILICQKRFEAKDSDII 69

Query: 238 LVTNPKSGTTWLKALVFSLINRHKFPVSS-GDHPLLVTNPHLLIPFLEGVYYESPNFDFT 414
           LVTNPKSGTTWLKALVF+L+NRHKFPVSS G+HPLLVTNPHLL+PFLEGVYYESP+FDF+
Sbjct: 70  LVTNPKSGTTWLKALVFALLNRHKFPVSSSGNHPLLVTNPHLLVPFLEGVYYESPDFDFS 129

Query: 415 ELPSPRLMNTHISLLSLPESVKSSSCKIVYCCRNPKDMFVSLWHFGKKLASQETADYPIE 594
            LPSPRLMNTHIS LSLPESVKSSSCKIVYCCRNPKDMFVSLWHFGKKLA +ETADYPIE
Sbjct: 130 SLPSPRLMNTHISHLSLPESVKSSSCKIVYCCRNPKDMFVSLWHFGKKLAPEETADYPIE 189

Query: 595 KAVEAFCQGKFIGGPFWDHVLEYWYASLXXPNKVLFVTYEELKXXT 732
           KAVEAFC+GKFIGGPFWDH+LEYWYAS   PNKVLFVTYEELK  T
Sbjct: 190 KAVEAFCEGKFIGGPFWDHILEYWYASRENPNKVLFVTYEELKKQT 235